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publication:juan [2019/11/25 07:36]
游文萱 [Journal Papers / 期刊論文]
publication:juan [2019/12/03 06:34]
游文萱 [Conference Proceedings / 研討會論文]
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 ===== Journal Papers / 期刊論文 ===== ===== Journal Papers / 期刊論文 =====
-  - Lee, W.-H., Chen, K.-P., Wang, K., Huang, H.-C.*, __**Juan, H.-F.**__* "​Characterizing the cancer-associated microbiome with small RNA sequencing data" //​Biochemical and Biophysical Research Communications// (Accepted). +  - Lee, W.-H., Chen, K.-P., Wang, K., Huang, H.-C.*, __**Juan, H.-F.**__* ​(2019) ​"​Characterizing the cancer-associated microbiome with small RNA sequencing data" //​Biochemical and Biophysical Research Communications//​ (Accepted).
-  - Cheung, H. Y. C., Hsu, C.-L., Tsuei, C.-Y., Kuo, T.-T., Huang, C.-T., Hsu, W.-M., Chung, Y.-H., Wu, H.-Y., Hsu, C.-C., Huang, H.-C.*, __**Juan, H.-F.**__* (2019) "​Combinatorial targeting of MTHFD2 and PAICS in purine synthesis as a novel therapeutic strategy"​ //Cell Death and Disease// (Accepted). +
-  - Hsieh, C.-H., Cheung, C. H. Y., Liu, Y.-L., Hou, C.-L., Hsu, C.-L., Huang, C.-T., Yang, T.-S., Chen, S.-F., Chen, C.-N., Hsu, W.-M.*, Huang, H.-C.*, __**Juan, H.-F.**__* (2019) "​Quantitative proteomics of Th-MYCN transgenic mice reveals aurora kinase inhibitor altered metabolic pathways and enhanced ACADM to suppress neuroblastoma progression"​ //Journal of Proteome Research// (Accepted).+
   - Chang, H.-C., Huang, H.-C., __**Juan, H.-F.**__*, Hsu, C.-L* (2019) "​Investigating the role of super-enhancer RNAs underlying embryonic stem cell differentiation"​ //BMC Genomics// (Accepted).   - Chang, H.-C., Huang, H.-C., __**Juan, H.-F.**__*, Hsu, C.-L* (2019) "​Investigating the role of super-enhancer RNAs underlying embryonic stem cell differentiation"​ //BMC Genomics// (Accepted).
-  - Wu, P.-Y., Yu, I-S., Lin, Y.-C., Chang, Y.-T., Chen, C.-C., Lin, K.-H., Tseng, T.-H., Kargren, M., Tai, Y.-L., Shen, T.-L., Liu, Y.-L., Wang, B.-J., Chang, C.-H., Chen, W.-M., __**Juan, H.-F.**__, Huang, S.-F., Chan, Y.-Y., Liao, Y.-F., Hsu, W.-M., Lee, H. (2019) "​Activation of aryl hydrocarbon receptor by kynurenine impairs progression and metastasis of neuroblastoma"​ //Cancer Research// (in press).+  ​- Hsieh, C.-H., Cheung, C. H. Y., Liu, Y.-L., Hou, C.-L., Hsu, C.-L., Huang, C.-T., Yang, T.-S., Chen, S.-F., Chen, C.-N., Hsu, W.-M.*, Huang, H.-C.*, __**Juan, H.-F.**__* (2019) "​Quantitative proteomics of Th-MYCN transgenic mice reveals aurora kinase inhibitor altered metabolic pathways and enhanced ACADM to suppress neuroblastoma progression"​ //Journal of Proteome Research// 18(11):​3850-3866. 
 +  - Cheung, H. Y. C., Hsu, C.-L., Tsuei, C.-Y., Kuo, T.-T., Huang, C.-T., Hsu, W.-M., Chung, Y.-H., Wu, H.-Y., Hsu, C.-C., Huang, H.-C.*, __**Juan, H.-F.**__* (2019) "​Combinatorial targeting of MTHFD2 and PAICS in purine synthesis as a novel therapeutic strategy"​ //Cell Death & Disease// 10:786. 
 +  ​- Wu, P.-Y., Yu, I-S., Lin, Y.-C., Chang, Y.-T., Chen, C.-C., Lin, K.-H., Tseng, T.-H., Kargren, M., Tai, Y.-L., Shen, T.-L., Liu, Y.-L., Wang, B.-J., Chang, C.-H., Chen, W.-M., __**Juan, H.-F.**__, Huang, S.-F., Chan, Y.-Y., Liao, Y.-F., Hsu, W.-M., Lee, H. (2019) "​Activation of aryl hydrocarbon receptor by kynurenine impairs progression and metastasis of neuroblastoma"​ //Cancer Research// ​79(21):5550-5562.
   - Huang, C.-T., Hsieh, C.-H., Lee, W.-C., Liu, Y.-L., Yang, T.-S., Hsu, W.-M., Oyang, Y.-J., Huang, H.-C.*, __**Juan, H.-F.**__* (2019) "​Therapeutic targeting of non-oncogene dependencies in high-risk neuroblastoma"​ //Clinical Cancer Research// 25(13):​4063-4078.   - Huang, C.-T., Hsieh, C.-H., Lee, W.-C., Liu, Y.-L., Yang, T.-S., Hsu, W.-M., Oyang, Y.-J., Huang, H.-C.*, __**Juan, H.-F.**__* (2019) "​Therapeutic targeting of non-oncogene dependencies in high-risk neuroblastoma"​ //Clinical Cancer Research// 25(13):​4063-4078.
   - Huang, C.-T., Hsieh, C.-H., Chung, Y.-H., Oyang, Y.-J., Huang, H.-C.*, __**Juan, H.-F.**__* (2019) "​Perturbational gene-expression signatures for combinatorial drug discovery"​ //​iScience//​ 15:291-306 (**Cell Press**).   - Huang, C.-T., Hsieh, C.-H., Chung, Y.-H., Oyang, Y.-J., Huang, H.-C.*, __**Juan, H.-F.**__* (2019) "​Perturbational gene-expression signatures for combinatorial drug discovery"​ //​iScience//​ 15:291-306 (**Cell Press**).
   - Yang, T.-W., Sahu, D., Chang, Y.-W., Hsu, C.-L., Hsieh, C.-H., Huang, H.-C.*, __**Juan, H.-F.**__* (2019) “RNA-binding proteomics reveals MATR3 interacting with lncRNA SNHG1 to enhance neuroblastoma progression” //Journal of Proteome Research// 18: 406–416.   - Yang, T.-W., Sahu, D., Chang, Y.-W., Hsu, C.-L., Hsieh, C.-H., Huang, H.-C.*, __**Juan, H.-F.**__* (2019) “RNA-binding proteomics reveals MATR3 interacting with lncRNA SNHG1 to enhance neuroblastoma progression” //Journal of Proteome Research// 18: 406–416.
-  - Chang, J.-Y., Yu, W.-H., __**Juan, H.-F.**__*, Huang, H.-C.* (2018) "​Dynamics of alternative polyadenylation in human preimplantation embryos"​ //​Biochemical and Biophysical Research// ​Sep 11. pii: S0006-291X(18)31946-6.+  - Chang, J.-Y., Yu, W.-H., __**Juan, H.-F.**__*, Huang, H.-C.* (2018) "​Dynamics of alternative polyadenylation in human preimplantation embryos"​ //​Biochemical and Biophysical Research ​Communications// 504(4):727-733.
   - Huang, C.-T., Hsieh, C.-H., Oyang, Y.-J., Huang, H.-C.*, __**Juan, H.-F.**__* (2018) "A large-scale gene expression intensity-based similarity metric for drug repositioning"​ //​iScience//​ 7: 40-52. (Cell Press)   - Huang, C.-T., Hsieh, C.-H., Oyang, Y.-J., Huang, H.-C.*, __**Juan, H.-F.**__* (2018) "A large-scale gene expression intensity-based similarity metric for drug repositioning"​ //​iScience//​ 7: 40-52. (Cell Press)
   - Lin, M.-C., Chien, P.-H., Wu, H.-Y., Chen, S.-T., __**Juan, H.-F.**__, Lou, P.-J.*, Huang, M.-C. (2018) "​C1GALT1 predicts poor prognosis and is a potential therapeutic target in head and neck cancer"​ //​Oncogene//​ Jun 21. doi: 10.1038/​s41388-018-0375-0.   - Lin, M.-C., Chien, P.-H., Wu, H.-Y., Chen, S.-T., __**Juan, H.-F.**__, Lou, P.-J.*, Huang, M.-C. (2018) "​C1GALT1 predicts poor prognosis and is a potential therapeutic target in head and neck cancer"​ //​Oncogene//​ Jun 21. doi: 10.1038/​s41388-018-0375-0.
   - Sahu, D., Ho, S.-Y., __**Juan, H.-F.**__*, Huang, H.-C.* (2018) "​High-risk,​ expression-based prognostic long noncoding RNA signature in neuroblastoma"​ //JNCI Cancer Spectrum// 2(2): pky015.   - Sahu, D., Ho, S.-Y., __**Juan, H.-F.**__*, Huang, H.-C.* (2018) "​High-risk,​ expression-based prognostic long noncoding RNA signature in neuroblastoma"​ //JNCI Cancer Spectrum// 2(2): pky015.
-  - Cheng, A.-N., Fan, C.-C., Lo, Y.-K., Kuo, C.-L., Wang, H.-C., Lien, I-H., Lin, S.-Y., Chen, C.-H., Jiang, S. S., Chang, I-S., __**Juan, H.-F.**__, Lyu, P.-C., Lee, A Y.-L.* "​Cdc7-Dbf4-mediated phosphorylation of HSP90-S164 stabilizes HSP90-HCLK2-MRN complex to enhance ATR/ATM signaling that overcomes replication stress in cancer"​ //​Scientific Reports// 7: 17024.+  - Cheng, A.-N., Fan, C.-C., Lo, Y.-K., Kuo, C.-L., Wang, H.-C., Lien, I-H., Lin, S.-Y., Chen, C.-H., Jiang, S. S., Chang, I-S., __**Juan, H.-F.**__, Lyu, P.-C., Lee, A Y.-L.* ​(2017) ​"​Cdc7-Dbf4-mediated phosphorylation of HSP90-S164 stabilizes HSP90-HCLK2-MRN complex to enhance ATR/ATM signaling that overcomes replication stress in cancer"​ //​Scientific Reports// 7: 17024.
   - Cheung, H. Y. C., Hsu, C.-L., Chen, K.-P., Chong, S.-T., Huang, H.-C.*, __**Juan, H.-F.**__* (2017) "​MCM2-regulated functional networks in lung cancer by multi-dimensional proteomic approach"​ //​Scientific Reports// 7(1):13302.   - Cheung, H. Y. C., Hsu, C.-L., Chen, K.-P., Chong, S.-T., Huang, H.-C.*, __**Juan, H.-F.**__* (2017) "​MCM2-regulated functional networks in lung cancer by multi-dimensional proteomic approach"​ //​Scientific Reports// 7(1):13302.
   - Hsu, C.-L., Wang, J.-K., Lu, P.-C., Huang, H.-C.*, and __**Juan, H.-F.**__* (2017) "​DynaPho:​ a web platform for inferring the dynamics of time-series phosphoproteomics"​ //​Bioinformatics//​ 33(22):​3664-3666.   - Hsu, C.-L., Wang, J.-K., Lu, P.-C., Huang, H.-C.*, and __**Juan, H.-F.**__* (2017) "​DynaPho:​ a web platform for inferring the dynamics of time-series phosphoproteomics"​ //​Bioinformatics//​ 33(22):​3664-3666.
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   - __**Juan, H.-F.**__, Hung, C.-C., Wang, K.-T., Chiou, S.-H.* (1999) “Comparison of three classes of snake neurotoxins by homology modeling and computer simulation graphics.” Biochem Biophys Res Commun. 257: 500-510.   - __**Juan, H.-F.**__, Hung, C.-C., Wang, K.-T., Chiou, S.-H.* (1999) “Comparison of three classes of snake neurotoxins by homology modeling and computer simulation graphics.” Biochem Biophys Res Commun. 257: 500-510.
 ===== Conference Proceedings / 研討會論文 ===== ===== Conference Proceedings / 研討會論文 =====
 +  - Kao, Y.-C., Chang, N.-W., Lai, C.P., Huang, H.-C.*, and __**Juan, H.-F.**__* " The role of ectopic ATP synthase in cell-to-cell communication by extracellular vesicles"​ //2019 The Taiwan Society for Biochemistry and Molecular Autumn Camp//, New Taipei City, Taiwan, Nov. 15-17, 2019.
 +  - Chang, Y.-W., Hou, J.-T., Liaw, Y-g., Huang, T.-Y., Chen, M.-C., Yin, C.-F., Hung, Y.-H., Hsu, C.-L., Huang, H.-C.*, and __**Juan, H.-F.**__* "​Mitochondrial ATP synthase trafficking toward the cell surface depending on KIF5B and Drp1 to serve as a new target for overcoming chemoresistance"​ //2019 Annual Meeting of Taiwan Society for Mitochondrial Research and Medicine//, Taipei, Taiwan, Nov. 09, 2019. (**Honorable Award**)
 +  - Wang, W. H., Hsu, C. L., Huang, H.-C.*, and __**Juan, H.-F.**__* "​Cyclic stretch-induced biological functions by phosphoproteomics profiling"​ //2019 Annual Meeting of Taiwan Society for Mitochondrial Research and Medicine//, Taipei, Taiwan, Nov. 09, 2019. (**Honorable Award**)
 +  - __**Juan, H.-F.**__* and Huang, H.-C.* "​Targeting Trafficking of Mitochondrial Key Energy Protein for Cancer Therapy"​ //16th conference of The Asian Society for Mitochondrial Research and Medicine (ASMRM2019)//,​ Fukuoka city, Japan, Oct. 3-5, 2019 (**E-poster**)
 +  - Huang, C.-T., Hsieh, C.-H., Lee, W.-C., Liu, Y.-L., Yang, T.-S., Hsu, W.-M., Oyang, Y.-J., Huang, H.-C.* and __**Juan, H.-F.**__* "​Therapeutic targeting of non-oncogene dependencies in high-risk neuroblastoma " //The 78th Annual Meeting of the Japanese Cancer Association//,​ Kyoto, Japan, Sep. 26-28, 2019. (**Travel Grant Award**)
 +  - Hsieh, C.-H., Cheung, C. H. Y., Liu, Y.-L., Hou, C.-L., Hsu, C.-L., Huang, C.-T., Yang, T.-S., Chen, S.-F., Chen, C.-N., Hsu, W.-M.*, Huang, H.-C.* and __**Juan, H.-F.**__* "​Targeting aurora kinases reduces neuroblastoma progression by altering the metabolic pathways via enhancing ACADM" //The 78th Annual Meeting of the Japanese Cancer Association//,​ Kyoto, Japan, Sep. 26-28, 2019. (**Travel Grant Award**)
   - Kao, Y.-C., Chang, N.-W., Chang, Y.-W., Lai, C. P., Huang, H.-C. and __**Juan, H.-F.**__* "​Ectopic ATP synthase induces extracellular vesicle release for cell-to-cell communications"​ The 8th Congress of the International Society for Extracellular Vesicles (ISEV2019), Kyoto, Japan, April 24-28, 2019.   - Kao, Y.-C., Chang, N.-W., Chang, Y.-W., Lai, C. P., Huang, H.-C. and __**Juan, H.-F.**__* "​Ectopic ATP synthase induces extracellular vesicle release for cell-to-cell communications"​ The 8th Congress of the International Society for Extracellular Vesicles (ISEV2019), Kyoto, Japan, April 24-28, 2019.
   - Wang, C.-C., Chang, Y.-W., Wu, C.-H., Cheung, C. H. Y., Lee, J.-L., Huang, H.-C.* and __**Juan, H.-F.**__* "​Mesenchymal stem cells-derived microenvironment promote lung cancer cell progression via c-Fos S374 phosphorylation in MAPK signaling pathway"​ //34th Joint Annual Conference of Biomedical Sciences//, Taipei, Taiwan, March 23-24, 2019. (**Best Poster Award**)   - Wang, C.-C., Chang, Y.-W., Wu, C.-H., Cheung, C. H. Y., Lee, J.-L., Huang, H.-C.* and __**Juan, H.-F.**__* "​Mesenchymal stem cells-derived microenvironment promote lung cancer cell progression via c-Fos S374 phosphorylation in MAPK signaling pathway"​ //34th Joint Annual Conference of Biomedical Sciences//, Taipei, Taiwan, March 23-24, 2019. (**Best Poster Award**)